Insertion junction: CLIP2.027593_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.027593
Chromosome:chromosome 3
Location:6734047
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g196200 (1 of 2) PTHR17630//PTHR17630:SF32 - DIENELACTONE HYDROLASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTGCCGGAGGCTCCCCATGACACTCCCGGTACACTCACTCCCCAGCAC
Internal bar code:CGAGGAGCGTGCTGCAAGTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1987
LEAP-Seq percent confirming:98.0769
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:GAGATCGAACAGCGGGGTAG
Suggested primer 2:GCCTCTCCTAAGGGTCCTCA