Insertion junction: CLIP2.027598_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.027598
Chromosome:chromosome 2
Location:6758543
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g387726 AST1 Aspartate aminotransferase; (1 of 1) K14454 - aspartate aminotransferase, cytoplasmic (GOT1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTGTCCACGGTTACACGTGTCGTGTGGGGTAGGGCTCAGGGCTCACAA
Internal bar code:GCCGCGGATTGGGTGGCGTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1578
LEAP-Seq percent confirming:98.0769
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:TTTTGCAACACCTCGCTTCG
Suggested primer 2:AAACGAAACGAAAGCCCGTG