Insertion junction: CLIP2.027602_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.027602
Chromosome:chromosome 16
Location:3234746
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g665850 FAP248 Flagellar Associated Protein 248 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCAGAGCCAACAAAGGGTGGACAGAAAGTTGTCGTTGCTGATTTAGGAC
Internal bar code:CCTAAGCACACTTCTCCATTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2748
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAGAGAAAAGCGGCAAAC
Suggested primer 2:CGCGAATCGTTCATTGCCAT