Insertion junction: CLIP2.027606_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.027606
Chromosome:chromosome 2
Location:7460304
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g392393 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCTCGCGACAGCCGGCGCGGCAGCTGCAGGCGCGGCAGCTGCAGGCGC
Internal bar code:ATGATTCTAACAGAGGACTCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2583
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCATCACAGCCTCAGCCA
Suggested primer 2:CGTGTCGCTGGAGTACAACT