Insertion junction: CLIP2.027611_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.027611
Chromosome:contig 55
Location:10046
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre55.g802248 (1 of 2) PTHR11076:SF12 - DNA REPAIR PROTEIN REV1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTCGTACTGCTCACGCAGCTTCTGGACCTGTGCGTGTGTGTGTTAAACC
Internal bar code:GTGCCAGGCCAGGTTGGAATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3830
LEAP-Seq percent confirming:0.649351
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:153
LEAP-Seq n unique pos:154

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGCACTTGAGCAGTTGCG
Suggested primer 2:GGGTTGTTGTTGCCATTCCC