Insertion junction: CLIP2.027623_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.027623
Chromosome:chromosome 9
Location:2895249
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g801028 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACCATAGCTCGCTCAGGCATGATGTGTGGCTGGCTGGCTGGCTGGCAG
Internal bar code:ATTAAGTTAGTAGCACAATATT

Confirmation - LEAP-Seq

LEAP-Seq distance:153
LEAP-Seq percent confirming:59.0909
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGAGGAGACCTGGCTTG
Suggested primer 2:TCCTTGGTCTGTCGCTTCAC