Insertion junction: CLIP2.027626_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.027626
Chromosome:chromosome 15
Location:911498
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g640101 (1 of 3) IPR000104//IPR006553 - Antifreeze protein, type I // Leucine-rich repeat, cysteine-containing subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGAAGAAGGGGTTGACATGGACATGGGCGGATGTTTGTAAAGTCCGTT
Internal bar code:CCCTGGCCTCCCGATTCTTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:567
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTCATGAACGTGACCCCC
Suggested primer 2:CTGACAAACACAGGCCTTGC