Insertion junction: CLIP2.027631_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.027631
Chromosome:chromosome 13
Location:2490078
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g579800 (1 of 1) 2.7.4.26 - Isopentenyl phosphate kinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACACCGTGCCTCCGGCGCCGCTCGTGCTGGCCTCCGCCTCGGGCAGCCC
Internal bar code:AACTCAGTGGTAAGGCATAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1393
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCACCGATAGCTCGTGAG
Suggested primer 2:CCACCCCTCAACACCACTTT