Insertion junction: CLIP2.027652_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.027652
Chromosome:chromosome 2
Location:1705937
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g085950 (1 of 1) PTHR33415//PTHR33415:SF3 - FAMILY NOT NAMED // EMB514 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCGCTGCCATCCTTGCGCACAGCGAAGAAGGCGCGAGCGTCCGCGTCC
Internal bar code:GTGTTAAGGCTGGGGGGTCGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:4981
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCTGTGGAAGAAGGAGCC
Suggested primer 2:GGCGCTGCACATAATCCAAG