Insertion junction: CLIP2.027652_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.027652
Chromosome:chromosome 11
Location:2063849
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467757 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGCTGCTGCTGCTCCTACCGCTGCCGCTGCAAGCAGTGACAGTAGCAG
Internal bar code:CTGATTTTTTAAAGATGTATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:182
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGAGGACGAAGATGAGGT
Suggested primer 2:CCTGCTGTCCTTTTCGTTGC