Insertion junction: CLIP2.027662_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.027662
Chromosome:chromosome 17
Location:2268553
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g713200 OMT2 (1 of 2) PTHR10283//PTHR10283:SF76 - SOLUTE CARRIER FAMILY 13 MEMBER // DICARBOXYLATE TRANSPORTER 1, CHLOROPLASTIC; Oxoglutarate:malate antiporter CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGCAATCGCCGCCCGAACCAGCACAGAACATGCCCGAACCAGCACAGA
Internal bar code:CTCCTTGGAAGTAGAGTTTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1388
LEAP-Seq percent confirming:18.6441
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:48
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTCGCAACATGGTGTGCT
Suggested primer 2:GAAGTAGGCGATGGCGATCA