Insertion junction: CLIP2.027666_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.027666
Chromosome:chromosome 12
Location:4963032
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g524700 HAD4 Haloacid dehalogenase-like hydrolase; (1 of 1) K18551 - pyrimidine and pyridine-specific 5'-nucleotidase (SDT1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGGACTGGTGGTAAGAGGGGTGCAACGTGTCAGGCACAGGGGGTTGGG
Internal bar code:CTTTTACGGTACGATATATTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2112
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGGCAGGGAAAACGTCAG
Suggested primer 2:TGGTCACTTGACATCAGGGC