Insertion junction: CLIP2.027681_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.027681
Chromosome:chromosome 12
Location:3010284
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g501850 FFT1 putative fructan fructosyltransferase; (1 of 2) PTHR31953//PTHR31953:SF1 - FAMILY NOT NAMED // BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV2-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCCCTTCCCTGCCTATGCCCTGGCTGAGCACAGCGCCGCCCCCCCCCT
Internal bar code:GGCTAGTAGCAGCACGGGAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3254
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TATCCACACACAGGTTCCGC
Suggested primer 2:CCCAGATTTCGATACCCGGG