Insertion junction: CLIP2.027686_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.027686
Chromosome:chromosome 12
Location:524539
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801346 (1 of 10) PF00176//PF00271 - SNF2 family N-terminal domain (SNF2_N) // Helicase conserved C-terminal domain (Helicase_C) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTCGCGATGACATGGCACGTCAAGGTGTTATGCTTTCGGGCACGTTA
Internal bar code:TATCCATACCTTTGCAATCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:111
LEAP-Seq percent confirming:43.75
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGAACTTGATGACGGCCT
Suggested primer 2:CGATGAGGACGATGAGGACG