Insertion junction: CLIP2.027706_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.027706
Chromosome:chromosome 2
Location:7885176
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g145750 AOT2 Amino acid transporter; (1 of 2) K14207 - solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2 (SLC38A2, SNAT2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCTGGCCCAGACTCCGTAATAACCTTACTTGAACTTTGAACTCCAGCA
Internal bar code:TTGGTAAGCATATCGTTACTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1775
LEAP-Seq percent confirming:67.8571
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCAGCAGTGAAGCATAGG
Suggested primer 2:GTAGTGGTGCGTGGTGGTAA