Insertion junction: CLIP2.027717_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.027717
Chromosome:chromosome 2
Location:5895217
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g117500 HXK1 Hexokinase; (1 of 1) K00844 - hexokinase (HK) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTAGCCAAGGCCGCTGCGGACAATCGCACGGGTGCTGGCAGCCTGGCAC
Internal bar code:CACTTAAGAGGAACGAGCATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2020
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:GACATGCCGTCCTCTAGCTC
Suggested primer 2:CTATGTAGAGCCTGCAGCCC