Insertion junction: CLIP2.027722_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.027722
Chromosome:chromosome 7
Location:5296045
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g349850 (1 of 1) IPR000104//IPR001680//IPR017986//IPR020472 - Antifreeze protein, type I // WD40 repeat // WD40-repeat-containing domain // G-protein beta WD-40 repeat intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAGGCAAGCATCTCAGCATCTTGGGTATGTCGGCAACCCGCGCTTGCGG
Internal bar code:AGTCACCACTAAGGGGGCGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1498
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CCTACTGACATCCCTCCCCA
Suggested primer 2:CCCTCACACCATCTGCCATT