Insertion junction: CLIP2.027724_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.027724
Chromosome:chromosome 7
Location:2197009
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g327150 (1 of 2) IPR001810//IPR003347 - F-box domain // JmjC domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAAGGTCACCAAGCCGCACGGCGGCCGGGCGCTCATGACGCTGCCCGCC
Internal bar code:CTGGGACTAGGTCGTAATGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:392
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGGTGAGGGATACTGGTC
Suggested primer 2:CACCTCCACATCTCCCCAAC