Insertion junction: CLIP2.027742_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.027742
Chromosome:chromosome 17
Location:2494650
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g715600 (1 of 1) PF11822 - Domain of unknown function (DUF3342) (DUF3342) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGTTGCTGTGCAAGTTCATCACTGGTAGTACTCCGGCGCGGCGCATGT
Internal bar code:CTGGACCATATATTTGCAGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2391
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGTTGGGGATGCATCAGG
Suggested primer 2:GAGATATCGGTGCACTGCGA