Insertion junction: CLIP2.027748_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.027748
Chromosome:chromosome 16
Location:4459164
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g667900 (1 of 11) IPR001471//IPR016177//IPR031112 - AP2/ERF domain // DNA-binding domain // AP2-like ethylene-responsive transcription factor; ANT-subfamily ortholog CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCGCCAACTGGTTGCCTCGGGCGTCATCGCCGCCATGGACCTGCCGCC
Internal bar code:ACATAAGTGCGCAAGCTGTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:391
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGGTATGGCTGCTGCTGA
Suggested primer 2:GCAGGGACAAGTGGTACTCC