Insertion junction: CLIP2.027753_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.027753
Chromosome:chromosome 3
Location:8981120
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800413 (1 of 1) PTHR10445 - GENERAL TRANSCRIPTION FACTOR IIF SUBUNIT 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGTTGACGTTGCAGTGAAGCCCAGCGCTCGACGTGGCGCAGCAACACA
Internal bar code:ACGCTATGTTCAGACTTACCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:706
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ACACCTCCTACCCTTACCCC
Suggested primer 2:CACAAGGAAAGGTGTGTGCG