Insertion junction: CLIP2.027754_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.027754
Chromosome:chromosome 2
Location:2116408
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g089200 HLM4,SET3 (1 of 1) PTHR22884//PTHR22884:SF370 - SET DOMAIN PROTEINS // HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH5-RELATED; Histone-lysine N-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTCAAGAGCATGTCAGCTCTGCTCTGCAGTCATGATACGCGCGATACG
Internal bar code:GCGGGCCGATACATATGTATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:303
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGTTCATGACGGAGAGCA
Suggested primer 2:GGTCTAGCTGCTCCAGTTGG