Insertion junction: CLIP2.027756_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.027756
Chromosome:chromosome 8
Location:4005616
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g382590 (1 of 1) K11662 - actin-related protein 6 (ACTR6, ARP6) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGTTAGCACATTTACCAATGCACTTCCGGCGCGGAACGCTCTGAGCCC
Internal bar code:GCCAGATAGCCTTCTGATACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1364
LEAP-Seq percent confirming:36.8421
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:ACAATCGTCCCCATCCCCTA
Suggested primer 2:CGTGCAGGGGGTTTTCAAAG