Insertion junction: CLIP2.027759_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.027759
Chromosome:chromosome 3
Location:5652466
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g186350 (1 of 3) PF03803 - Scramblase (Scramblase) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAGCTCGGGTGGGGTCGGGTCGGGGCATGGGGCGTAAGTGTGTATCGG
Internal bar code:GCCATGACACGCTCTAACTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1697
LEAP-Seq percent confirming:97.0588
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GTACTTGTGCACCAGGCTCT
Suggested primer 2:GTGTTATGGCCGCCAACATG