Insertion junction: CLIP2.027767_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.027767
Chromosome:chromosome 8
Location:576586
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g359800 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCTTCGAGGTGCGGTTGGTCCCCCCCCAAGCCCCACAATCCCGTTGCA
Internal bar code:TTTAAGTAGGACCTAGTGGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2164
LEAP-Seq percent confirming:79.1667
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAGACTTTCACGGGTAGT
Suggested primer 2:AACGCTGCAAATTGGTGACC