Insertion junction: CLIP2.027773_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.027773
Chromosome:chromosome 9
Location:4892712
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g801061 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGAACTCACGCCCTTTCGGACTAGTAGCTTCCGCCGGATGAACCAGCT
Internal bar code:TTTAGCCCCTGTAGACTCGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2970
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGGTTAGTATCCCCGCCT
Suggested primer 2:TCAGACCCTCAAACGACACG