Insertion junction: CLIP2.027780_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.027780
Chromosome:chromosome 14
Location:2629506
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g625300 CAX3 (1 of 1) PTHR12266//PTHR12266:SF9 - NA+/CA2+ K+ INDEPENDENT EXCHANGER // CATION/CALCIUM EXCHANGER 3-RELATED; CAX family cation antiporter, membrane protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGGGCAATGCACGGGGCCGTTTGTCGCTTTTTAGCGTTGGCACGCCCA
Internal bar code:TTTAATAGTTTCTCCGATTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2459
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:ATTCCTTCTGCCACCTTCCG
Suggested primer 2:CGACACTGCGCTTTTTGACA