Insertion junction: CLIP2.027783_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.027783
Chromosome:chromosome 7
Location:3312045
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g334700 ATG101 (1 of 1) PF07855 - Protein of unknown function (DUF1649) (DUF1649); Autophagy-related protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTACGATGTGAGCTCCGCACAGCGACGGGGACAGCGTGCAACGCCCGCGC
Internal bar code:AGTTAAGCGATGTCAAATGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2730
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCAAAGGACGTGGACTCG
Suggested primer 2:CAGTAGAGCCGCTCATCCTG