Insertion junction: CLIP2.027786_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.027786
Chromosome:chromosome 4
Location:3022363
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g225100 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAATGCGACACCGGCGATACCGGCGATGGCGGGAACAGTCGCGAGGAC
Internal bar code:GTGGAAATGTTCTGTTGTGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:265
LEAP-Seq percent confirming:22.2222
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:42
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGCTCTGTGACGTCAAAG
Suggested primer 2:CGATGGAAGTGCGCAGATTG