Insertion junction: CLIP2.027786_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.027786
Chromosome:chromosome 4
Location:3022366
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g225100 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGATGAAACCCGCAACTCTGCCGTCTCCTCAAGGCCAGTGCTGGGGCCG
Internal bar code:GTGGAAATGTTCTGTTGTGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1761
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CGATGGAAGTGCGCAGATTG
Suggested primer 2:AGGGCTCTGTGACGTCAAAG