Insertion junction: CLIP2.027788_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.027788
Chromosome:chromosome 3
Location:5457018
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g184250 CAM9 Calmodulin-like protein; (1 of 38) IPR002048//IPR011992 - EF-hand domain // EF-hand domain pair intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCTCGCCATATCGTGCTGTAGATCCTGTTGATGGTATCTGCCCCTCGC
Internal bar code:AATCCATACATAGTGCCCATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:5901
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:105
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:105

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAACCTTGGTACTCGGTG
Suggested primer 2:TCACGCACGTAGCAAGTTCT