Insertion junction: CLIP2.027788_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.027788
Chromosome:chromosome 3
Location:5457022
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g184250 CAM9 Calmodulin-like protein; (1 of 38) IPR002048//IPR011992 - EF-hand domain // EF-hand domain pair intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCTGTCGCCGGGCATCCCGTAAGCGCGCACATGCGCAGGTGGGGCTGG
Internal bar code:TATATAATAAAGTTTCGTTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:4401
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:109
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:109

Suggested primers for confirmation by PCR

Suggested primer 1:TCACGCACGTAGCAAGTTCT
Suggested primer 2:AGCAACCTTGGTACTCGGTG