Insertion junction: CLIP2.027790_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.027790
Chromosome:chromosome 8
Location:2310014
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g370950 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGCCTTGGGCGAGCCACGCATGAAGCGGGCCTCGGGCCGGTAGGGCTT
Internal bar code:CTGCCCCCAAGATAACGTTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1808
LEAP-Seq percent confirming:70.9677
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TCTTGAGCACCCTAAGCAGC
Suggested primer 2:TACACCCCTTTCGTTGCCTC