Insertion junction: CLIP2.027798_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.027798
Chromosome:chromosome 11
Location:2695965
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095071 (1 of 2) K01148 - poly(A)-specific ribonuclease (PARN) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGAGGGTTGGGTGGGCGGAGTTGGGGGTGGGGGGAGTTGAGTTGGGTGT
Internal bar code:TTGGCGGGGCTGAGCGTCATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:219
LEAP-Seq percent confirming:42.1053
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:AGGACATCGCCTTTGTGGAG
Suggested primer 2:CACAAGTGTCTGGCAGCAAC