Insertion junction: CLIP2.027810_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.027810
Chromosome:chromosome 8
Location:2599703
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g373150 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCCGGCCGCAGCAGGCCAGGCTGCCTGCTGCGGCCGCTGCCACCAGCA
Internal bar code:CGTTCGCGCCCGCCCTTTTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3822
LEAP-Seq percent confirming:95.5556
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTTTGCGGGAGTCTGACT
Suggested primer 2:ATTTCTTCCGCGGTGTCAGT