Insertion junction: CLIP2.027811_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.027811
Chromosome:chromosome 15
Location:721062
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g637350 TRM3,TMG13 tRNA (guanosine-2'-O)-methyltransferase; (1 of 2) PTHR12029//PTHR12029:SF11 - RNA METHYLTRANSFERASE // METHYLTRANSFERASE TARBP1-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCGGAGAGCACAAGACGCATGGCGGGACACGTCGGGGCGGGAGGGTTG
Internal bar code:ACAAGGCGGTGTACACATGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1618
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGTCACACATGCGCAACC
Suggested primer 2:ACAACCGCGATCACAATTGC