Insertion junction: CLIP2.027814_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.027814
Chromosome:chromosome 16
Location:4795740
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g687600 (1 of 7) IPR000104//IPR020683 - Antifreeze protein, type I // Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCTTGGGCCCGGCGGCGGCGCTTGCTCTCAGCTACCGGTGGTTGCGGA
Internal bar code:AGCCTTTAAATTTACCGTTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1965
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTGCTGTTGCTGTTGTT
Suggested primer 2:CAGCAGCATCATGTCCAACG