Insertion junction: CLIP2.027819_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.027819
Chromosome:chromosome 12
Location:1180076
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g490550 CDS
Cre12.g490600 (1 of 2) IPR009060//IPR015940 - UBA-like // Ubiquitin-associated domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGCAGTCGAAGTTGGCCGAAATCCGCGCCAAAGCTAGTAATACAGCAT
Internal bar code:CATGTGGATCTGGAACAGGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:945
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TCACTGACCCTCACCTGACA
Suggested primer 2:CTGTACAGGCGGGTGACTTT