Insertion junction: CLIP2.027830_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.027830
Chromosome:chromosome 13
Location:1942211
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g576200 (1 of 3) PF01048 - Phosphorylase superfamily (PNP_UDP_1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGATTTCTCCATGTAACTTTATTGCACGCGCCAAATGCGTTGGAAGTTTG
Internal bar code:CGTACTTCTTACCTGTTCTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2278
LEAP-Seq percent confirming:84.375
LEAP-Seq n confirming:81
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCACACCCATACCCATCC
Suggested primer 2:GTCCACACCATTTGCTGCAG