Insertion junction: CLIP2.027834_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.027834
Chromosome:chromosome 1
Location:4057660
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g800078 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACTTTACCCAGCCCCAGCAGCACCAGCACCAGCAGCAGCAGCGGGGCAG
Internal bar code:TAAGATACCCGGCGGCAGTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1686
LEAP-Seq percent confirming:88.4615
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GACAGCAAATCCCTGGAGCT
Suggested primer 2:CTGTGTCTACATGGGTGCGT