Insertion junction: CLIP2.027838_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.027838
Chromosome:chromosome 1
Location:3073542
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g019500 (1 of 2) PTHR22847//PTHR22847:SF431 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCTGTCCCATCTCACACACACACACACACACACACACACACACACACA
Internal bar code:TCCAACAAAGTGTGGCTGGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2316
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CGAAGGCGCTTTTGGTTGAA
Suggested primer 2:ACGCAGACGACAAAAGCCTA