Insertion junction: CLIP2.027843_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.027843
Chromosome:chromosome 9
Location:2559782
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g392652 (1 of 1) 1.5.1.22 - Strombine dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGGCTGCTGGGGTCGCCGGACCCCAAGTGCGCAGCTTGACTGCGCTGC
Internal bar code:GGGGGATGTCGTTTCCTGTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:429
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTGGAAAGGTGGTGAGTG
Suggested primer 2:ACTCTTGAACACGGCTCCTG