Insertion junction: CLIP2.027853_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.027853
Chromosome:chromosome 10
Location:1210367
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g426200 RAP4,OPR44,CLR21 OctotricoPeptide Repeat protein 44; (1 of 39) PF08373 - RAP domain (RAP) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTCCACCGGCGCCGCCGGAGCTCGCCAGGGCGGTGCCACCGCAGCTAC
Internal bar code:TATCTAGGATGGTGATTTTCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1329
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTACCACCGAACCTTGAC
Suggested primer 2:TTGCAGAGCTCGACAAGGAG