Insertion junction: CLIP2.027855_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.027855
Chromosome:chromosome 10
Location:1463843
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g428400 PUS7 (1 of 2) 5.4.99.24 - 23S rRNA pseudouridine(955/2504/2580) synthase; RNA pseudouridine synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCTCAGGTGTCCTGCTGCGTCCATTGACTTAAACGATACCTAGCCCGC
Internal bar code:GAAGGTATGGCCCGTCAAATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3483
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCACATCCCTCTAGCCGT
Suggested primer 2:CGCTTCCCCCATCACTGAAT