Insertion junction: CLIP2.027860_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.027860
Chromosome:chromosome 3
Location:687758
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145807 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCTGCTGGAAGAGTGGGATGCCATGGCGGCGGCGGCGGCGGCGGCGGC
Internal bar code:TATGACAAATATAGGACGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4819
LEAP-Seq percent confirming:96.7213
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:CCACTGCACATCAAACAGGC
Suggested primer 2:CGCCTACCTGATTAGCGTGT