Insertion junction: CLIP2.027870_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.027870
Chromosome:chromosome 7
Location:6136388
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g355800 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAGCGCCCAGCTGCCGTCGGGGCGGAGGCTGCTGGCCGCGCGCTGCAG
Internal bar code:TAGATAGACCCTATCAGAGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3082
LEAP-Seq percent confirming:41.6667
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTCTCAGCCGGTATCACC
Suggested primer 2:ATCTCGTCATTGTGGGGCAG