Insertion junction: CLIP2.027871_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.027871
Chromosome:chromosome 8
Location:1858062
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g367250 FAP176 (1 of 239) IPR016024 - Armadillo-type fold; Flagellar Associated Protein 176 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTACGTGTGTCGCGCGTCTCTTCCGGGACTTCGCAAGGGTCATAAGGAGA
Internal bar code:CTGGTGGTCCTCCAGGCCCTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1027
LEAP-Seq percent confirming:41.1765
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:TATGGCTAAGGACCCCTCCC
Suggested primer 2:TGAACGGTCGACATGAAGCA