Insertion junction: CLIP2.027882_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.027882
Chromosome:chromosome 10
Location:384592
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g420512 (1 of 13) 3.1.13.4 - Poly(A)-specific ribonuclease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTGTATGCGCGCCCCGACCTCTAAGTCACACAACACCAGCAGCCTCA
Internal bar code:TCTAAGGACCGGACGGTTTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1003
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGGTGAAGAATGCCTGCT
Suggested primer 2:GGTGATAGCGGTGGTGGTAG