Insertion junction: CLIP2.027882_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.027882
Chromosome:chromosome 10
Location:384597
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g420512 (1 of 13) 3.1.13.4 - Poly(A)-specific ribonuclease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACACACACACATGCACACACACGCACCTGATGTGTGCAGGCGCACGTC
Internal bar code:TCTAAGGACCGGACGGTTTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2079
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGATAGCGGTGGTGGTAG
Suggested primer 2:GGAGGTGAAGAATGCCTGCT