Insertion junction: CLIP2.027889_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.027889
Chromosome:chromosome 10
Location:3925316
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g446650 HEL46,MER (1 of 1) K15271 - ATP-dependent DNA helicase HFM1/MER3 [EC:3.6.4.12] (HFM1, MER3); conserved protein with DEAD/DEAH box helicase domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGAAGCCCACACCCGCCACCAGGCAGGTCTGTGGACAGGAGCGGGTAG
Internal bar code:GAGGCCGAACCGGTCCGTTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:5851
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAGCAAGAACGACTTCCT
Suggested primer 2:CGCACCTCCTTCTGTGTCAT